Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm5745-201ENSMUST00000183748 313 ntBASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm24526-201ENSMUST00000082921 158 ntBASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trub1Q8C0D0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Gm14760-201ENSMUST00000121831 999 ntBASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trub1Q8C0D0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Gm12384-201ENSMUST00000119228 919 ntBASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trub1Q8C0D0 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms