Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm13736-201ENSMUST00000119272 253 ntBASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup54Q8BTS4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.01□□□□□ -0.33
Nup54Q8BTS4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gm43179-201ENSMUST00000198797 275 ntBASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Nup54Q8BTS4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm37737-201ENSMUST00000195013 1638 ntBASIC13□□□□□ -0.33
Nup54Q8BTS4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm4366-201ENSMUST00000201488 1342 ntBASIC13□□□□□ -0.33
Nup54Q8BTS4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm12058-201ENSMUST00000118614 437 ntBASIC13□□□□□ -0.33
Nup54Q8BTS4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm5637-201ENSMUST00000153890 1119 ntBASIC13□□□□□ -0.33
Nup54Q8BTS4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Nup54Q8BTS4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup54Q8BTS4 Gm38266-201ENSMUST00000194931 421 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms