Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Gm37131-201ENSMUST00000192502 1561 ntBASIC17.75■□□□□ 0.43
Usp54Q8BL06 Gm18227-201ENSMUST00000211082 1468 ntBASIC17.75■□□□□ 0.43
Usp54Q8BL06 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp54Q8BL06 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm6485-201ENSMUST00000160676 439 ntBASIC17.74■□□□□ 0.43
Usp54Q8BL06 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm7593-201ENSMUST00000187246 644 ntBASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm11892-201ENSMUST00000117711 1202 ntBASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm8731-201ENSMUST00000118088 412 ntBASIC17.74■□□□□ 0.43
Usp54Q8BL06 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gm2517-201ENSMUST00000215651 348 ntBASIC17.74■□□□□ 0.43
Usp54Q8BL06 CT009713.8-202ENSMUST00000224732 385 ntBASIC17.74■□□□□ 0.43
Usp54Q8BL06 AC169036.1-201ENSMUST00000227994 296 ntBASIC17.74■□□□□ 0.43
Usp54Q8BL06 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp54Q8BL06 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.73■□□□□ 0.43
Usp54Q8BL06 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC17.73■□□□□ 0.43
Usp54Q8BL06 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 Gm45575-201ENSMUST00000210283 548 ntBASIC17.73■□□□□ 0.43
Usp54Q8BL06 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp54Q8BL06 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp54Q8BL06 AC126257.1-201ENSMUST00000213195 1536 ntBASIC17.73■□□□□ 0.43
Usp54Q8BL06 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp54Q8BL06 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.73■□□□□ 0.43
Usp54Q8BL06 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Gm10152-201ENSMUST00000193475 1344 ntBASIC17.72■□□□□ 0.43
Usp54Q8BL06 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Gm42863-201ENSMUST00000197875 2958 ntBASIC17.72■□□□□ 0.43
Usp54Q8BL06 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.72■□□□□ 0.43
Usp54Q8BL06 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp54Q8BL06 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp54Q8BL06 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms