Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nop53Q8BK35 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.67□□□□□ -0.22
Nop53Q8BK35 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Gm14350-201ENSMUST00000116642 640 ntBASIC13.67□□□□□ -0.22
Nop53Q8BK35 Gm14127-201ENSMUST00000117906 678 ntBASIC13.67□□□□□ -0.22
Nop53Q8BK35 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.67□□□□□ -0.22
Nop53Q8BK35 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nop53Q8BK35 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.67□□□□□ -0.22
Nop53Q8BK35 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.67□□□□□ -0.22
Nop53Q8BK35 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.67□□□□□ -0.22
Nop53Q8BK35 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nop53Q8BK35 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm37744-201ENSMUST00000194616 1590 ntBASIC13.66□□□□□ -0.22
Nop53Q8BK35 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.66□□□□□ -0.22
Nop53Q8BK35 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm5035-201ENSMUST00000215581 927 ntBASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.66□□□□□ -0.22
Nop53Q8BK35 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.66□□□□□ -0.22
Nop53Q8BK35 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.66□□□□□ -0.22
Nop53Q8BK35 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nop53Q8BK35 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.65□□□□□ -0.22
Nop53Q8BK35 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Mir686-201ENSMUST00000102174 109 ntBASIC13.65□□□□□ -0.22
Nop53Q8BK35 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.65□□□□□ -0.22
Nop53Q8BK35 Gm5687-201ENSMUST00000118252 640 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms