Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp2bQ8BJF9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Gm6152-201ENSMUST00000151704 340 ntBASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp2bQ8BJF9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Mir6392-201ENSMUST00000184924 108 ntBASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp2bQ8BJF9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp2bQ8BJF9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms