Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Matn2-203ENSMUST00000226766 3252 ntBASIC12.21□□□□□ -0.46
SynbQ8BI41 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Gm25668-201ENSMUST00000157700 129 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.2□□□□□ -0.46
SynbQ8BI41 Gm20482-202ENSMUST00000174729 825 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Mir433-201ENSMUST00000093564 124 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SynbQ8BI41 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.2□□□□□ -0.46
SynbQ8BI41 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.2□□□□□ -0.46
SynbQ8BI41 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SynbQ8BI41 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.19□□□□□ -0.46
SynbQ8BI41 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Gm7809-201ENSMUST00000153199 742 ntBASIC12.19□□□□□ -0.46
SynbQ8BI41 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.19□□□□□ -0.46
SynbQ8BI41 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.19□□□□□ -0.46
SynbQ8BI41 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SynbQ8BI41 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.18□□□□□ -0.46
SynbQ8BI41 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.18□□□□□ -0.46
SynbQ8BI41 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SynbQ8BI41 Gm8805-201ENSMUST00000117848 313 ntBASIC12.18□□□□□ -0.46
SynbQ8BI41 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SynbQ8BI41 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.18□□□□□ -0.46
SynbQ8BI41 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.18□□□□□ -0.46
SynbQ8BI41 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.18□□□□□ -0.46
SynbQ8BI41 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.18□□□□□ -0.46
SynbQ8BI41 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.18□□□□□ -0.46
SynbQ8BI41 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms