Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vrk1Q80X41 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.18□□□□□ -0.46
Vrk1Q80X41 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.18□□□□□ -0.46
Vrk1Q80X41 Gm24990-201ENSMUST00000157406 323 ntBASIC12.18□□□□□ -0.46
Vrk1Q80X41 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Gm38092-201ENSMUST00000195600 653 ntBASIC12.18□□□□□ -0.46
Vrk1Q80X41 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.18□□□□□ -0.46
Vrk1Q80X41 Gm18212-201ENSMUST00000211678 889 ntBASIC12.18□□□□□ -0.46
Vrk1Q80X41 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vrk1Q80X41 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.17□□□□□ -0.46
Vrk1Q80X41 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Gm13875-201ENSMUST00000120162 282 ntBASIC12.17□□□□□ -0.46
Vrk1Q80X41 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Gm2260-201ENSMUST00000184965 657 ntBASIC12.17□□□□□ -0.46
Vrk1Q80X41 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vrk1Q80X41 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.16□□□□□ -0.46
Vrk1Q80X41 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.16□□□□□ -0.46
Vrk1Q80X41 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vrk1Q80X41 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms