Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Gm26464-201ENSMUST00000157094 305 ntBASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Mir7654-201ENSMUST00000185082 70 ntBASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Gm19078-201ENSMUST00000206311 727 ntBASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Gm18307-201ENSMUST00000206864 949 ntBASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctdp1Q7TSG2 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ctdp1Q7TSG2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Gm14127-201ENSMUST00000117906 678 ntBASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Gm27701-201ENSMUST00000184498 110 ntBASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Gm9908-201ENSMUST00000211534 448 ntBASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctdp1Q7TSG2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms