Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm21811-201ENSMUST00000096485 930 ntBASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx55Q6ZPL9 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Gm7851-201ENSMUST00000117574 323 ntBASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Gm270-201ENSMUST00000223010 976 ntBASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx55Q6ZPL9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ddx55Q6ZPL9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx55Q6ZPL9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms