Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Snrnp40Q6PE01 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Gm11628-201ENSMUST00000117568 171 ntBASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Snrnp40Q6PE01 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Gm13813-201ENSMUST00000120998 787 ntBASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Gm11597-201ENSMUST00000121423 964 ntBASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Gm12208-201ENSMUST00000122004 163 ntBASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Gm19353-201ENSMUST00000184561 445 ntBASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Gm9230-201ENSMUST00000188228 532 ntBASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Snrnp40Q6PE01 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms