Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
ParpbpQ6IRT3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Gm37497-201ENSMUST00000195830 798 ntBASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ParpbpQ6IRT3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Gm4271-201ENSMUST00000174444 973 ntBASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ParpbpQ6IRT3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms