Protein–RNA interactions for Protein: Q6DFV6

Fndc3c1, Fibronectin type III domain containing protein 3C1, mousemouse

Predictions only

Length 1,356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc3c1Q6DFV6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Fndc3c1Q6DFV6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc3c1Q6DFV6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc3c1Q6DFV6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc3c1Q6DFV6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc3c1Q6DFV6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc3c1Q6DFV6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc3c1Q6DFV6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc3c1Q6DFV6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gm23596-201ENSMUST00000104304 132 ntBASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Mir1901-201ENSMUST00000122616 78 ntBASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gm8492-201ENSMUST00000182375 987 ntBASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Mir7677-201ENSMUST00000184226 67 ntBASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gm18304-201ENSMUST00000189162 546 ntBASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gm5733-201ENSMUST00000190232 939 ntBASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc3c1Q6DFV6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc3c1Q6DFV6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.15□□□□□ -0.14
Fndc3c1Q6DFV6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms