Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Notch3Q61982 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Notch3Q61982 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Notch3Q61982 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm43947-201ENSMUST00000203019 959 ntBASIC9.81□□□□□ -0.84
Notch3Q61982 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm18212-201ENSMUST00000211678 889 ntBASIC9.81□□□□□ -0.84
Notch3Q61982 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm37691-201ENSMUST00000192147 2573 ntBASIC9.81□□□□□ -0.84
Notch3Q61982 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Notch3Q61982 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Notch3Q61982 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Notch3Q61982 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Notch3Q61982 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Notch3Q61982 Gm11439-201ENSMUST00000118598 409 ntBASIC9.8□□□□□ -0.84
Notch3Q61982 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Notch3Q61982 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Notch3Q61982 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Notch3Q61982 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.8□□□□□ -0.84
Notch3Q61982 Gm37042-201ENSMUST00000193816 581 ntBASIC9.8□□□□□ -0.84
Notch3Q61982 AU022133-201ENSMUST00000200601 873 ntBASIC9.8□□□□□ -0.84
Notch3Q61982 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.8□□□□□ -0.84
Notch3Q61982 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC9.8□□□□□ -0.84
Notch3Q61982 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Notch3Q61982 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Notch3Q61982 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.79□□□□□ -0.84
Notch3Q61982 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Gm16479-201ENSMUST00000121706 932 ntBASIC9.79□□□□□ -0.84
Notch3Q61982 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.79□□□□□ -0.84
Notch3Q61982 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.79□□□□□ -0.84
Notch3Q61982 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.79□□□□□ -0.84
Notch3Q61982 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.79□□□□□ -0.84
Notch3Q61982 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
Notch3Q61982 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.79□□□□□ -0.84
Notch3Q61982 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Notch3Q61982 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Notch3Q61982 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.79□□□□□ -0.84
Notch3Q61982 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Notch3Q61982 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms