Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cd47Q61735 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd47Q61735 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cd47Q61735 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd47Q61735 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cd47Q61735 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cd47Q61735 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cd47Q61735 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cd47Q61735 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.66□□□□□ -0.54
Cd47Q61735 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Cd47Q61735 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.66□□□□□ -0.54
Cd47Q61735 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.66□□□□□ -0.54
Cd47Q61735 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.66□□□□□ -0.54
Cd47Q61735 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Gm5866-201ENSMUST00000177881 973 ntBASIC11.66□□□□□ -0.54
Cd47Q61735 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Gm45668-201ENSMUST00000211271 493 ntBASIC11.66□□□□□ -0.54
Cd47Q61735 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.66□□□□□ -0.54
Cd47Q61735 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.66□□□□□ -0.54
Cd47Q61735 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.66□□□□□ -0.54
Cd47Q61735 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC11.66□□□□□ -0.54
Cd47Q61735 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.66□□□□□ -0.54
Cd47Q61735 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cd47Q61735 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cd47Q61735 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cd47Q61735 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.65□□□□□ -0.54
Cd47Q61735 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cd47Q61735 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Cd47Q61735 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.65□□□□□ -0.54
Cd47Q61735 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.65□□□□□ -0.54
Cd47Q61735 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cd47Q61735 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cd47Q61735 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.65□□□□□ -0.54
Cd47Q61735 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.65□□□□□ -0.54
Cd47Q61735 Gm6152-201ENSMUST00000151704 340 ntBASIC11.65□□□□□ -0.54
Cd47Q61735 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Cd47Q61735 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.65□□□□□ -0.54
Cd47Q61735 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.65□□□□□ -0.54
Cd47Q61735 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.65□□□□□ -0.54
Cd47Q61735 Gm44069-201ENSMUST00000204898 506 ntBASIC11.65□□□□□ -0.54
Cd47Q61735 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.65□□□□□ -0.54
Cd47Q61735 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.65□□□□□ -0.54
Cd47Q61735 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC11.65□□□□□ -0.54
Cd47Q61735 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC11.65□□□□□ -0.54
Cd47Q61735 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cd47Q61735 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cd47Q61735 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms