Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Gm4870-201ENSMUST00000198525 1251 ntBASIC13.42□□□□□ -0.26
Foxd4Q60688 Gm25857-201ENSMUST00000082788 129 ntBASIC13.42□□□□□ -0.26
Foxd4Q60688 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.42□□□□□ -0.26
Foxd4Q60688 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.42□□□□□ -0.26
Foxd4Q60688 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.42□□□□□ -0.26
Foxd4Q60688 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.42□□□□□ -0.26
Foxd4Q60688 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Foxd4Q60688 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Foxd4Q60688 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Foxd4Q60688 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.41□□□□□ -0.26
Foxd4Q60688 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Foxd4Q60688 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.41□□□□□ -0.26
Foxd4Q60688 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Foxd4Q60688 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.41□□□□□ -0.26
Foxd4Q60688 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC13.41□□□□□ -0.26
Foxd4Q60688 Gm9908-201ENSMUST00000211534 448 ntBASIC13.41□□□□□ -0.26
Foxd4Q60688 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC13.41□□□□□ -0.26
Foxd4Q60688 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Foxd4Q60688 Gm9797-201ENSMUST00000052902 613 ntBASIC13.41□□□□□ -0.26
Foxd4Q60688 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.41□□□□□ -0.26
Foxd4Q60688 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Foxd4Q60688 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Gm45114-201ENSMUST00000208280 1349 ntBASIC13.4□□□□□ -0.26
Foxd4Q60688 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.4□□□□□ -0.26
Foxd4Q60688 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Foxd4Q60688 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Gm29608-201ENSMUST00000190444 463 ntBASIC13.4□□□□□ -0.26
Foxd4Q60688 Gm44061-201ENSMUST00000203962 1195 ntBASIC13.4□□□□□ -0.26
Foxd4Q60688 Gm19269-201ENSMUST00000211401 804 ntBASIC13.4□□□□□ -0.26
Foxd4Q60688 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.4□□□□□ -0.26
Foxd4Q60688 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Foxd4Q60688 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Foxd4Q60688 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms