Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.15□□□□□ -0.46
Nr1h4Q60641 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.15□□□□□ -0.46
Nr1h4Q60641 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.15□□□□□ -0.47
Nr1h4Q60641 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.15□□□□□ -0.47
Nr1h4Q60641 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nr1h4Q60641 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nr1h4Q60641 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Nr1h4Q60641 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.14□□□□□ -0.47
Nr1h4Q60641 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gm15321-201ENSMUST00000121290 288 ntBASIC12.14□□□□□ -0.47
Nr1h4Q60641 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gm44397-201ENSMUST00000195950 113 ntBASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.14□□□□□ -0.47
Nr1h4Q60641 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Itm2b-204ENSMUST00000228637 783 ntBASIC12.14□□□□□ -0.47
Nr1h4Q60641 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.14□□□□□ -0.47
Nr1h4Q60641 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.14□□□□□ -0.47
Nr1h4Q60641 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nr1h4Q60641 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.13□□□□□ -0.47
Nr1h4Q60641 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.13□□□□□ -0.47
Nr1h4Q60641 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm16202-201ENSMUST00000117532 544 ntBASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm5687-201ENSMUST00000118252 640 ntBASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm13689-201ENSMUST00000119360 685 ntBASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm6983-201ENSMUST00000214912 628 ntBASIC12.13□□□□□ -0.47
Nr1h4Q60641 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.13□□□□□ -0.47
Nr1h4Q60641 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nr1h4Q60641 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms