Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm10434-201ENSMUST00000101158 471 ntBASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm8018-201ENSMUST00000173536 789 ntBASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps54Q5SPW0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Gm25214-201ENSMUST00000104573 129 ntBASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Gm11531-201ENSMUST00000117614 555 ntBASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Gm7584-201ENSMUST00000175829 940 ntBASIC15.25■□□□□ 0.03
Vps54Q5SPW0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Gm45925-201ENSMUST00000218882 744 ntBASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vps54Q5SPW0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Gm15703-201ENSMUST00000120250 880 ntBASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Gm11597-201ENSMUST00000121423 964 ntBASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Gm38341-201ENSMUST00000195357 515 ntBASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Gm5950-201ENSMUST00000213337 772 ntBASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps54Q5SPW0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms