Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.59□□□□□ -0.39
Scn2bQ56A07 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.59□□□□□ -0.39
Scn2bQ56A07 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.59□□□□□ -0.39
Scn2bQ56A07 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn2bQ56A07 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn2bQ56A07 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.58□□□□□ -0.4
Scn2bQ56A07 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Gm4984-201ENSMUST00000115987 360 ntBASIC12.58□□□□□ -0.4
Scn2bQ56A07 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.58□□□□□ -0.4
Scn2bQ56A07 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.58□□□□□ -0.4
Scn2bQ56A07 Gm18473-201ENSMUST00000220543 868 ntBASIC12.58□□□□□ -0.4
Scn2bQ56A07 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.58□□□□□ -0.4
Scn2bQ56A07 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn2bQ56A07 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.57□□□□□ -0.4
Scn2bQ56A07 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Gm12291-201ENSMUST00000121627 311 ntBASIC12.57□□□□□ -0.4
Scn2bQ56A07 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Gm27839-201ENSMUST00000184242 106 ntBASIC12.57□□□□□ -0.4
Scn2bQ56A07 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.57□□□□□ -0.4
Scn2bQ56A07 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scn2bQ56A07 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms