Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
Rc3h1Q4VGL6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rc3h1Q4VGL6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rc3h1Q4VGL6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.06
Rc3h1Q4VGL6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Rc3h1Q4VGL6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Rc3h1Q4VGL6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Rc3h1Q4VGL6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rc3h1Q4VGL6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rc3h1Q4VGL6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Gm37201-201ENSMUST00000191845 523 ntBASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Gm39404-201ENSMUST00000216350 313 ntBASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Gm18515-201ENSMUST00000219755 797 ntBASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rc3h1Q4VGL6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm24830-201ENSMUST00000102024 166 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm25890-201ENSMUST00000177643 165 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm22614-201ENSMUST00000178300 165 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm44967-201ENSMUST00000207047 631 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm22042-201ENSMUST00000082989 165 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm26232-201ENSMUST00000083360 166 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm24136-201ENSMUST00000083374 165 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm26110-201ENSMUST00000083971 165 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rc3h1Q4VGL6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm11930-201ENSMUST00000117788 190 ntBASIC14.68□□□□□ -0.06
Rc3h1Q4VGL6 Gm14999-201ENSMUST00000121039 624 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms