Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim80Q3V061 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim80Q3V061 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim80Q3V061 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim80Q3V061 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim80Q3V061 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim80Q3V061 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim80Q3V061 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim80Q3V061 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim80Q3V061 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim80Q3V061 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim80Q3V061 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Trim80Q3V061 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim80Q3V061 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim80Q3V061 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim80Q3V061 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim80Q3V061 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Gm13385-201ENSMUST00000121089 220 ntBASIC13.19□□□□□ -0.3
Trim80Q3V061 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim80Q3V061 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim80Q3V061 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim80Q3V061 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.19□□□□□ -0.3
Trim80Q3V061 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim80Q3V061 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim80Q3V061 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim80Q3V061 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim80Q3V061 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Gm27892-201ENSMUST00000185017 106 ntBASIC13.18□□□□□ -0.3
Trim80Q3V061 Gm21470-201ENSMUST00000187680 696 ntBASIC13.18□□□□□ -0.3
Trim80Q3V061 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Gm5279-201ENSMUST00000199575 745 ntBASIC13.18□□□□□ -0.3
Trim80Q3V061 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim80Q3V061 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.18□□□□□ -0.3
Trim80Q3V061 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim80Q3V061 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim80Q3V061 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.18□□□□□ -0.3
Trim80Q3V061 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim80Q3V061 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim80Q3V061 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim80Q3V061 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim80Q3V061 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim80Q3V061 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim80Q3V061 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim80Q3V061 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Trim80Q3V061 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim80Q3V061 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim80Q3V061 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim80Q3V061 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim80Q3V061 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim80Q3V061 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms