Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Q3U1D9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Gm15808-201ENSMUST00000119046 604 ntBASIC11.07□□□□□ -0.64
Q3U1D9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Q3U1D9 Gm17376-201ENSMUST00000166016 84 ntBASIC11.07□□□□□ -0.64
Q3U1D9 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.07□□□□□ -0.64
Q3U1D9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.07□□□□□ -0.64
Q3U1D9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.07□□□□□ -0.64
Q3U1D9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.07□□□□□ -0.64
Q3U1D9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Q3U1D9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Q3U1D9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Q3U1D9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.06□□□□□ -0.64
Q3U1D9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.06□□□□□ -0.64
Q3U1D9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Q3U1D9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
Q3U1D9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Gm15236-201ENSMUST00000117309 379 ntBASIC11.06□□□□□ -0.64
Q3U1D9 Gm13813-201ENSMUST00000120998 787 ntBASIC11.06□□□□□ -0.64
Q3U1D9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Q3U1D9 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.06□□□□□ -0.64
Q3U1D9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.06□□□□□ -0.64
Q3U1D9 Gm37201-201ENSMUST00000191845 523 ntBASIC11.06□□□□□ -0.64
Q3U1D9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.06□□□□□ -0.64
Q3U1D9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Q3U1D9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Q3U1D9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Q3U1D9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.06□□□□□ -0.64
Q3U1D9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Q3U1D9 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.06□□□□□ -0.64
Q3U1D9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.06□□□□□ -0.64
Q3U1D9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.05□□□□□ -0.64
Q3U1D9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Q3U1D9 Gm11531-201ENSMUST00000117614 555 ntBASIC11.05□□□□□ -0.64
Q3U1D9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms