Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Mir6392-201ENSMUST00000184924 108 ntBASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Gm45668-201ENSMUST00000211271 493 ntBASIC10.87□□□□□ -0.67
Fndc4Q3TR08 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Fndc4Q3TR08 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.86□□□□□ -0.67
Fndc4Q3TR08 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Mir7654-201ENSMUST00000185082 70 ntBASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.86□□□□□ -0.67
Fndc4Q3TR08 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Fndc4Q3TR08 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms