Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Gm11941-201ENSMUST00000119904 610 ntBASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Gm6407-201ENSMUST00000176468 549 ntBASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Gm10076-201ENSMUST00000073238 384 ntBASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim7Q3TJD7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pdlim7Q3TJD7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim7Q3TJD7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim7Q3TJD7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim7Q3TJD7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Pdlim7Q3TJD7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim7Q3TJD7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim7Q3TJD7 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Gm14460-201ENSMUST00000121511 639 ntBASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Gm9230-201ENSMUST00000188228 532 ntBASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Gm18041-201ENSMUST00000218210 618 ntBASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Gm1821-202ENSMUST00000227415 750 ntBASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim7Q3TJD7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim7Q3TJD7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms