Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.3□□□□□ -0.44
Ptchd3Q0EEE2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm13689-201ENSMUST00000119360 685 ntBASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm18307-201ENSMUST00000206864 949 ntBASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm18624-201ENSMUST00000220966 658 ntBASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ptchd3Q0EEE2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Gm38144-201ENSMUST00000192790 465 ntBASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ptchd3Q0EEE2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ptchd3Q0EEE2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.27□□□□□ -0.44
Ptchd3Q0EEE2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.27□□□□□ -0.44
Ptchd3Q0EEE2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms