Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.53□□□□□ -0.4
Sox4Q06831 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.53□□□□□ -0.4
Sox4Q06831 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.53□□□□□ -0.4
Sox4Q06831 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Gm5904-201ENSMUST00000210286 865 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Gm10608-202ENSMUST00000213924 676 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 Gm45930-201ENSMUST00000221330 292 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Gm24526-201ENSMUST00000082921 158 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 Gm22058-201ENSMUST00000083393 310 ntBASIC12.53□□□□□ -0.4
Sox4Q06831 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Sox4Q06831 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox4Q06831 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox4Q06831 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Sox4Q06831 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox4Q06831 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sox4Q06831 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox4Q06831 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox4Q06831 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox4Q06831 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.52□□□□□ -0.4
Sox4Q06831 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Sox4Q06831 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Sox4Q06831 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.52□□□□□ -0.4
Sox4Q06831 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox4Q06831 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox4Q06831 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Gm16296-201ENSMUST00000159905 325 ntBASIC12.52□□□□□ -0.41
Sox4Q06831 Gm27501-201ENSMUST00000183599 107 ntBASIC12.52□□□□□ -0.41
Sox4Q06831 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox4Q06831 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Olfr284-202ENSMUST00000206647 966 ntBASIC12.52□□□□□ -0.41
Sox4Q06831 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox4Q06831 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sox4Q06831 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox4Q06831 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.52□□□□□ -0.41
Sox4Q06831 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.52□□□□□ -0.41
Sox4Q06831 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox4Q06831 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Sox4Q06831 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sox4Q06831 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox4Q06831 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sox4Q06831 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox4Q06831 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Gm27516-201ENSMUST00000184237 98 ntBASIC12.51□□□□□ -0.41
Sox4Q06831 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox4Q06831 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sox4Q06831 Gm45331-201ENSMUST00000209868 554 ntBASIC12.51□□□□□ -0.41
Sox4Q06831 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox4Q06831 Gm18935-201ENSMUST00000212692 664 ntBASIC12.51□□□□□ -0.41
Sox4Q06831 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.51□□□□□ -0.41
Sox4Q06831 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.51□□□□□ -0.41
Sox4Q06831 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.51□□□□□ -0.41
Sox4Q06831 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.51□□□□□ -0.41
Sox4Q06831 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox4Q06831 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox4Q06831 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox4Q06831 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.51□□□□□ -0.41
Sox4Q06831 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox4Q06831 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox4Q06831 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms