Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm13888-201ENSMUST00000119148 422 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm11675-201ENSMUST00000121873 832 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.87□□□□□ -0.67
Col8a1Q00780 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm17040-202ENSMUST00000170597 889 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm9540-201ENSMUST00000188230 478 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm7848-201ENSMUST00000210739 718 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Col8a1Q00780 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.87□□□□□ -0.67
Col8a1Q00780 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col8a1Q00780 Ntng1-201ENSMUST00000051253 327 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Col8a1Q00780 Gm22058-201ENSMUST00000083393 310 ntBASIC10.87□□□□□ -0.67
Col8a1Q00780 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.87□□□□□ -0.67
Col8a1Q00780 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Col8a1Q00780 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col8a1Q00780 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.86□□□□□ -0.67
Col8a1Q00780 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.86□□□□□ -0.67
Col8a1Q00780 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.86□□□□□ -0.67
Col8a1Q00780 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.86□□□□□ -0.67
Col8a1Q00780 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Gm18730-201ENSMUST00000218038 343 ntBASIC10.86□□□□□ -0.67
Col8a1Q00780 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.86□□□□□ -0.67
Col8a1Q00780 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.86□□□□□ -0.67
Col8a1Q00780 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a1Q00780 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Col8a1Q00780 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Col8a1Q00780 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a1Q00780 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms