Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim43cP86449 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim43cP86449 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43cP86449 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43cP86449 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43cP86449 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.83□□□□□ -0.19
Trim43cP86449 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
Trim43cP86449 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim43cP86449 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim43cP86449 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.83□□□□□ -0.2
Trim43cP86449 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Trim43cP86449 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim43cP86449 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim43cP86449 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim43cP86449 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim43cP86449 Gm38158-201ENSMUST00000194617 339 ntBASIC13.83□□□□□ -0.2
Trim43cP86449 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trim43cP86449 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.83□□□□□ -0.2
Trim43cP86449 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Trim43cP86449 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim43cP86449 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim43cP86449 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim43cP86449 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Trim43cP86449 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim43cP86449 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim43cP86449 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim43cP86449 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim43cP86449 Gm24548-201ENSMUST00000158650 108 ntBASIC13.82□□□□□ -0.2
Trim43cP86449 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim43cP86449 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim43cP86449 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.82□□□□□ -0.2
Trim43cP86449 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim43cP86449 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim43cP86449 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim43cP86449 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43cP86449 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.81□□□□□ -0.2
Trim43cP86449 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim43cP86449 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim43cP86449 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim43cP86449 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim43cP86449 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim43cP86449 Gm15824-201ENSMUST00000119516 955 ntBASIC13.81□□□□□ -0.2
Trim43cP86449 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.81□□□□□ -0.2
Trim43cP86449 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim43cP86449 Snora78-201ENSMUST00000158630 128 ntBASIC13.81□□□□□ -0.2
Trim43cP86449 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim43cP86449 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Gm37424-201ENSMUST00000191727 561 ntBASIC13.81□□□□□ -0.2
Trim43cP86449 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim43cP86449 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43cP86449 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms