Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
H3f3aP84244 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H3f3aP84244 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
H3f3aP84244 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.34□□□□□ -0.59
H3f3aP84244 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.34□□□□□ -0.59
H3f3aP84244 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.34□□□□□ -0.59
H3f3aP84244 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.34□□□□□ -0.59
H3f3aP84244 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
H3f3aP84244 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.34□□□□□ -0.59
H3f3aP84244 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
H3f3aP84244 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
H3f3aP84244 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm22018-201ENSMUST00000104357 131 ntBASIC11.34□□□□□ -0.59
H3f3aP84244 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.34□□□□□ -0.59
H3f3aP84244 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.34□□□□□ -0.59
H3f3aP84244 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
H3f3aP84244 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.34□□□□□ -0.59
H3f3aP84244 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.34□□□□□ -0.59
H3f3aP84244 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.34□□□□□ -0.59
H3f3aP84244 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.34□□□□□ -0.59
H3f3aP84244 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.34□□□□□ -0.59
H3f3aP84244 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.34□□□□□ -0.59
H3f3aP84244 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.34□□□□□ -0.59
H3f3aP84244 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.34□□□□□ -0.59
H3f3aP84244 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm24526-201ENSMUST00000082921 158 ntBASIC11.34□□□□□ -0.59
H3f3aP84244 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.34□□□□□ -0.59
H3f3aP84244 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
H3f3aP84244 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H3f3aP84244 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
H3f3aP84244 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
H3f3aP84244 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.33□□□□□ -0.6
H3f3aP84244 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.33□□□□□ -0.6
H3f3aP84244 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.33□□□□□ -0.6
H3f3aP84244 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.33□□□□□ -0.6
H3f3aP84244 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Gm12957-201ENSMUST00000117835 377 ntBASIC11.33□□□□□ -0.6
H3f3aP84244 Gm24548-201ENSMUST00000158650 108 ntBASIC11.33□□□□□ -0.6
H3f3aP84244 Gm3890-201ENSMUST00000182416 207 ntBASIC11.33□□□□□ -0.6
H3f3aP84244 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
H3f3aP84244 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.33□□□□□ -0.6
H3f3aP84244 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.33□□□□□ -0.6
H3f3aP84244 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.33□□□□□ -0.6
H3f3aP84244 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
H3f3aP84244 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3aP84244 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.33□□□□□ -0.6
H3f3aP84244 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms