Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SgcbP82349 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SgcbP82349 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.38□□□□□ -0.59
SgcbP82349 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SgcbP82349 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.37□□□□□ -0.59
SgcbP82349 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.37□□□□□ -0.59
SgcbP82349 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
SgcbP82349 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Gm11591-201ENSMUST00000120063 702 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.37□□□□□ -0.59
SgcbP82349 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Gm7809-201ENSMUST00000153199 742 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.37□□□□□ -0.59
SgcbP82349 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Gm6222-202ENSMUST00000182143 629 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Gm42693-201ENSMUST00000196779 631 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Gm6013-201ENSMUST00000212264 699 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.37□□□□□ -0.59
SgcbP82349 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Mir339-201ENSMUST00000083659 96 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.37□□□□□ -0.59
SgcbP82349 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.37□□□□□ -0.59
SgcbP82349 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SgcbP82349 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SgcbP82349 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Gm23931-201ENSMUST00000103842 109 ntBASIC11.36□□□□□ -0.59
SgcbP82349 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Gm6023-201ENSMUST00000118217 606 ntBASIC11.36□□□□□ -0.59
SgcbP82349 Gm14921-201ENSMUST00000118643 908 ntBASIC11.36□□□□□ -0.59
SgcbP82349 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.36□□□□□ -0.59
SgcbP82349 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.36□□□□□ -0.59
SgcbP82349 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.36□□□□□ -0.59
SgcbP82349 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.36□□□□□ -0.59
SgcbP82349 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SgcbP82349 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.36□□□□□ -0.59
SgcbP82349 Gm38002-201ENSMUST00000193255 180 ntBASIC11.36□□□□□ -0.59
SgcbP82349 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC11.36□□□□□ -0.59
SgcbP82349 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.36□□□□□ -0.59
SgcbP82349 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SgcbP82349 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.36□□□□□ -0.59
SgcbP82349 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SgcbP82349 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.36□□□□□ -0.59
SgcbP82349 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms