Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.09□□□□□ -0.31
Msx3P70354 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.09□□□□□ -0.31
Msx3P70354 Gm9630-201ENSMUST00000178304 885 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Gm27839-201ENSMUST00000184242 106 ntBASIC13.09□□□□□ -0.31
Msx3P70354 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Msx3P70354 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Gm5035-201ENSMUST00000215581 927 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.09□□□□□ -0.31
Msx3P70354 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Msx3P70354 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Msx3P70354 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.09□□□□□ -0.31
Msx3P70354 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.09□□□□□ -0.31
Msx3P70354 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Msx3P70354 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.09□□□□□ -0.31
Msx3P70354 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Msx3P70354 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Msx3P70354 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Msx3P70354 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Gm11478-201ENSMUST00000117851 599 ntBASIC13.08□□□□□ -0.32
Msx3P70354 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.08□□□□□ -0.32
Msx3P70354 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.08□□□□□ -0.32
Msx3P70354 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Gm44124-201ENSMUST00000204159 472 ntBASIC13.08□□□□□ -0.32
Msx3P70354 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.08□□□□□ -0.32
Msx3P70354 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.08□□□□□ -0.32
Msx3P70354 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Msx3P70354 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.08□□□□□ -0.32
Msx3P70354 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Msx3P70354 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.07□□□□□ -0.32
Msx3P70354 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.07□□□□□ -0.32
Msx3P70354 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Msx3P70354 Gm29649-201ENSMUST00000185649 419 ntBASIC13.07□□□□□ -0.32
Msx3P70354 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Msx3P70354 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msx3P70354 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Msx3P70354 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msx3P70354 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msx3P70354 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msx3P70354 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Msx3P70354 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msx3P70354 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Msx3P70354 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms