Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.04□□□□□ -0.16
Hmgb1P63158 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.04□□□□□ -0.16
Hmgb1P63158 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb1P63158 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hmgb1P63158 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Hmgb1P63158 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmgb1P63158 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.03□□□□□ -0.16
Hmgb1P63158 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hmgb1P63158 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmgb1P63158 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Gm11637-201ENSMUST00000120601 592 ntBASIC14.03□□□□□ -0.16
Hmgb1P63158 Gm13123-201ENSMUST00000122173 492 ntBASIC14.03□□□□□ -0.16
Hmgb1P63158 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Hmgb1P63158 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.03□□□□□ -0.16
Hmgb1P63158 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmgb1P63158 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hmgb1P63158 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmgb1P63158 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Hmgb1P63158 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.03□□□□□ -0.16
Hmgb1P63158 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb1P63158 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Hmgb1P63158 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hmgb1P63158 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hmgb1P63158 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Hmgb1P63158 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.02□□□□□ -0.16
Hmgb1P63158 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hmgb1P63158 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.02□□□□□ -0.16
Hmgb1P63158 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb1P63158 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.02□□□□□ -0.17
Hmgb1P63158 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Gm2231-201ENSMUST00000125661 612 ntBASIC14.02□□□□□ -0.17
Hmgb1P63158 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hmgb1P63158 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.02□□□□□ -0.17
Hmgb1P63158 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Gm8099-201ENSMUST00000200510 742 ntBASIC14.02□□□□□ -0.17
Hmgb1P63158 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hmgb1P63158 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmgb1P63158 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.02□□□□□ -0.17
Hmgb1P63158 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
Hmgb1P63158 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb1P63158 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Hmgb1P63158 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb1P63158 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.01□□□□□ -0.17
Hmgb1P63158 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms