Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Crnkl1P63154 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.61□□□□□ -0.39
Crnkl1P63154 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Gm16215-201ENSMUST00000161990 637 ntBASIC12.61□□□□□ -0.39
Crnkl1P63154 Gm24694-201ENSMUST00000180054 110 ntBASIC12.61□□□□□ -0.39
Crnkl1P63154 Gm4804-201ENSMUST00000182234 999 ntBASIC12.61□□□□□ -0.39
Crnkl1P63154 Gm27663-201ENSMUST00000184839 110 ntBASIC12.61□□□□□ -0.39
Crnkl1P63154 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Crnkl1P63154 Gm5425-201ENSMUST00000214125 459 ntBASIC12.61□□□□□ -0.39
Crnkl1P63154 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Crnkl1P63154 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.61□□□□□ -0.39
Crnkl1P63154 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.61□□□□□ -0.39
Crnkl1P63154 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.61□□□□□ -0.39
Crnkl1P63154 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Crnkl1P63154 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.61□□□□□ -0.39
Crnkl1P63154 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Crnkl1P63154 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.6□□□□□ -0.39
Crnkl1P63154 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.6□□□□□ -0.39
Crnkl1P63154 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm5866-201ENSMUST00000177881 973 ntBASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Crnkl1P63154 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm7730-201ENSMUST00000212486 454 ntBASIC12.6□□□□□ -0.39
Crnkl1P63154 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.6□□□□□ -0.39
Crnkl1P63154 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.6□□□□□ -0.39
Crnkl1P63154 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.6□□□□□ -0.39
Crnkl1P63154 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.6□□□□□ -0.39
Crnkl1P63154 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.6□□□□□ -0.39
Crnkl1P63154 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Crnkl1P63154 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Crnkl1P63154 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.59□□□□□ -0.39
Crnkl1P63154 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Crnkl1P63154 Gm9522-201ENSMUST00000182394 926 ntBASIC12.59□□□□□ -0.39
Crnkl1P63154 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.59□□□□□ -0.39
Crnkl1P63154 Gm29667-201ENSMUST00000190817 490 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms