Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.07□□□□□ -0.96
Rpl39P62892 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.07□□□□□ -0.96
Rpl39P62892 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rpl39P62892 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.06□□□□□ -0.96
Rpl39P62892 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Rpl39P62892 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Rpl39P62892 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Rpl39P62892 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.06□□□□□ -0.96
Rpl39P62892 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Gm14822-201ENSMUST00000122247 291 ntBASIC9.06□□□□□ -0.96
Rpl39P62892 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Rpl39P62892 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.06□□□□□ -0.96
Rpl39P62892 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.06□□□□□ -0.96
Rpl39P62892 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Rpl39P62892 Gm27680-201ENSMUST00000184192 160 ntBASIC9.06□□□□□ -0.96
Rpl39P62892 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.06□□□□□ -0.96
Rpl39P62892 Gm27741-201ENSMUST00000185060 237 ntBASIC9.06□□□□□ -0.96
Rpl39P62892 Gm43094-201ENSMUST00000196549 921 ntBASIC9.06□□□□□ -0.96
Rpl39P62892 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.06□□□□□ -0.96
Rpl39P62892 Gm6888-201ENSMUST00000221983 706 ntBASIC9.06□□□□□ -0.96
Rpl39P62892 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Rpl39P62892 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Rpl39P62892 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Rpl39P62892 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.06□□□□□ -0.96
Rpl39P62892 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rpl39P62892 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.05□□□□□ -0.96
Rpl39P62892 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.05□□□□□ -0.96
Rpl39P62892 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.05□□□□□ -0.96
Rpl39P62892 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rpl39P62892 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm15376-201ENSMUST00000122258 783 ntBASIC9.05□□□□□ -0.96
Rpl39P62892 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.05□□□□□ -0.96
Rpl39P62892 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms