Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sec61a1P61620 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Gm5356-201ENSMUST00000093326 615 ntBASIC11.24□□□□□ -0.61
Sec61a1P61620 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sec61a1P61620 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.24□□□□□ -0.61
Sec61a1P61620 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Sec61a1P61620 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Sec61a1P61620 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.24□□□□□ -0.61
Sec61a1P61620 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sec61a1P61620 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sec61a1P61620 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.23□□□□□ -0.61
Sec61a1P61620 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61a1P61620 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.23□□□□□ -0.61
Sec61a1P61620 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Sec61a1P61620 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.23□□□□□ -0.61
Sec61a1P61620 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.23□□□□□ -0.61
Sec61a1P61620 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.23□□□□□ -0.61
Sec61a1P61620 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sec61a1P61620 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.23□□□□□ -0.61
Sec61a1P61620 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sec61a1P61620 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.22□□□□□ -0.61
Sec61a1P61620 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.22□□□□□ -0.61
Sec61a1P61620 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.22□□□□□ -0.61
Sec61a1P61620 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sec61a1P61620 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Gm43433-201ENSMUST00000196573 481 ntBASIC11.22□□□□□ -0.61
Sec61a1P61620 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.22□□□□□ -0.61
Sec61a1P61620 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.22□□□□□ -0.61
Sec61a1P61620 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.22□□□□□ -0.61
Sec61a1P61620 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sec61a1P61620 Gm8463-201ENSMUST00000208573 613 ntBASIC11.22□□□□□ -0.61
Sec61a1P61620 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sec61a1P61620 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms