Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rfx2P48379 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfx2P48379 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Gm15370-201ENSMUST00000117158 253 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Gm4986-201ENSMUST00000119731 549 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.35□□□□□ -0.27
Rfx2P48379 Gm24548-201ENSMUST00000158650 108 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfx2P48379 Gm7584-201ENSMUST00000175829 940 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Gm27243-201ENSMUST00000183964 521 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.35□□□□□ -0.27
Rfx2P48379 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Gm43758-201ENSMUST00000199500 367 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfx2P48379 Gm45865-201ENSMUST00000211815 945 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rfx2P48379 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rfx2P48379 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.35□□□□□ -0.27
Rfx2P48379 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.35□□□□□ -0.27
Rfx2P48379 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Rfx2P48379 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfx2P48379 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rfx2P48379 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfx2P48379 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rfx2P48379 Gm10434-201ENSMUST00000101158 471 ntBASIC13.34□□□□□ -0.27
Rfx2P48379 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Gm8227-201ENSMUST00000223306 571 ntBASIC13.34□□□□□ -0.27
Rfx2P48379 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rfx2P48379 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rfx2P48379 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Rfx2P48379 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.34□□□□□ -0.27
Rfx2P48379 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
Rfx2P48379 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfx2P48379 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Rfx2P48379 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rfx2P48379 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rfx2P48379 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rfx2P48379 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Rfx2P48379 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rfx2P48379 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Rfx2P48379 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rfx2P48379 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Rfx2P48379 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.33□□□□□ -0.27
Rfx2P48379 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx2P48379 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.33□□□□□ -0.28
Rfx2P48379 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rfx2P48379 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms