Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl28P41105 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rpl28P41105 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl28P41105 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl28P41105 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl28P41105 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl28P41105 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Gm9025-201ENSMUST00000122415 1575 ntBASIC8.56□□□□□ -1.04
Rpl28P41105 AC113060.1-201ENSMUST00000225689 1573 ntBASIC8.56□□□□□ -1.04
Rpl28P41105 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rpl28P41105 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rpl28P41105 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
Rpl28P41105 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rpl28P41105 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC8.56□□□□□ -1.04
Rpl28P41105 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC8.56□□□□□ -1.04
Rpl28P41105 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rpl28P41105 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rpl28P41105 Gm15240-201ENSMUST00000118156 720 ntBASIC8.56□□□□□ -1.04
Rpl28P41105 Gm14730-201ENSMUST00000122378 1045 ntBASIC8.56□□□□□ -1.04
Rpl28P41105 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC8.56□□□□□ -1.04
Rpl28P41105 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rpl28P41105 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC8.56□□□□□ -1.04
Rpl28P41105 Gm7498-201ENSMUST00000203282 1084 ntBASIC8.56□□□□□ -1.04
Rpl28P41105 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rpl28P41105 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC8.56□□□□□ -1.04
Rpl28P41105 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rpl28P41105 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Gm42840-201ENSMUST00000200303 2251 ntBASIC8.56□□□□□ -1.04
Rpl28P41105 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rpl28P41105 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
Rpl28P41105 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Gm5053-201ENSMUST00000208361 1678 ntBASIC8.56□□□□□ -1.04
Rpl28P41105 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rpl28P41105 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl28P41105 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Rpl28P41105 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC8.55□□□□□ -1.04
Rpl28P41105 Gm44942-201ENSMUST00000096093 2072 ntBASIC8.55□□□□□ -1.04
Rpl28P41105 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC8.55□□□□□ -1.04
Rpl28P41105 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Rpl28P41105 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Rpl28P41105 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC8.55□□□□□ -1.04
Rpl28P41105 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC8.55□□□□□ -1.04
Rpl28P41105 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC8.55□□□□□ -1.04
Rpl28P41105 Gm12151-201ENSMUST00000121374 290 ntBASIC8.55□□□□□ -1.04
Rpl28P41105 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC8.55□□□□□ -1.04
Rpl28P41105 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Gm24694-201ENSMUST00000180054 110 ntBASIC8.55□□□□□ -1.04
Rpl28P41105 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl28P41105 Gm27663-201ENSMUST00000184839 110 ntBASIC8.55□□□□□ -1.04
Rpl28P41105 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Rpl28P41105 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms