Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox6P40645 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox6P40645 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox6P40645 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox6P40645 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.97□□□□□ -0.49
Sox6P40645 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox6P40645 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.97□□□□□ -0.49
Sox6P40645 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox6P40645 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Sox6P40645 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.97□□□□□ -0.49
Sox6P40645 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox6P40645 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox6P40645 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox6P40645 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.97□□□□□ -0.49
Sox6P40645 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.97□□□□□ -0.49
Sox6P40645 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox6P40645 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sox6P40645 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sox6P40645 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox6P40645 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox6P40645 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox6P40645 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox6P40645 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox6P40645 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox6P40645 Gm12928-201ENSMUST00000117115 573 ntBASIC11.96□□□□□ -0.49
Sox6P40645 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox6P40645 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox6P40645 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox6P40645 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox6P40645 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox6P40645 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox6P40645 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox6P40645 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.96□□□□□ -0.5
Sox6P40645 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Sox6P40645 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox6P40645 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox6P40645 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox6P40645 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox6P40645 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox6P40645 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sox6P40645 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox6P40645 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.95□□□□□ -0.5
Sox6P40645 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox6P40645 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox6P40645 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox6P40645 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sox6P40645 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.95□□□□□ -0.5
Sox6P40645 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox6P40645 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.95□□□□□ -0.5
Sox6P40645 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms