Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TfamP40630 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TfamP40630 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.32□□□□□ -0.44
TfamP40630 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.32□□□□□ -0.44
TfamP40630 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.32□□□□□ -0.44
TfamP40630 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.32□□□□□ -0.44
TfamP40630 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.32□□□□□ -0.44
TfamP40630 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.32□□□□□ -0.44
TfamP40630 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.32□□□□□ -0.44
TfamP40630 Gm8515-201ENSMUST00000194852 576 ntBASIC12.32□□□□□ -0.44
TfamP40630 Gm7287-201ENSMUST00000205267 602 ntBASIC12.32□□□□□ -0.44
TfamP40630 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Gm8598-201ENSMUST00000221184 836 ntBASIC12.32□□□□□ -0.44
TfamP40630 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TfamP40630 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.32□□□□□ -0.44
TfamP40630 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TfamP40630 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
TfamP40630 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.31□□□□□ -0.44
TfamP40630 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TfamP40630 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.31□□□□□ -0.44
TfamP40630 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
TfamP40630 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.31□□□□□ -0.44
TfamP40630 Gm14928-201ENSMUST00000120198 477 ntBASIC12.31□□□□□ -0.44
TfamP40630 Gm13123-201ENSMUST00000122173 492 ntBASIC12.31□□□□□ -0.44
TfamP40630 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Proscos-202ENSMUST00000178990 666 ntBASIC12.31□□□□□ -0.44
TfamP40630 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.31□□□□□ -0.44
TfamP40630 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Gm6180-201ENSMUST00000065243 498 ntBASIC12.31□□□□□ -0.44
TfamP40630 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.31□□□□□ -0.44
TfamP40630 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TfamP40630 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.31□□□□□ -0.44
TfamP40630 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.31□□□□□ -0.44
TfamP40630 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.31□□□□□ -0.44
TfamP40630 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.31□□□□□ -0.44
TfamP40630 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.31□□□□□ -0.44
TfamP40630 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TfamP40630 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TfamP40630 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TfamP40630 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TfamP40630 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms