Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Timp3P39876 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Gm22018-201ENSMUST00000104357 131 ntBASIC10.47□□□□□ -0.73
Timp3P39876 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.47□□□□□ -0.73
Timp3P39876 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.47□□□□□ -0.73
Timp3P39876 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.47□□□□□ -0.73
Timp3P39876 Gm26185-201ENSMUST00000157692 266 ntBASIC10.47□□□□□ -0.73
Timp3P39876 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Gm43118-201ENSMUST00000199149 775 ntBASIC10.47□□□□□ -0.73
Timp3P39876 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.47□□□□□ -0.73
Timp3P39876 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.47□□□□□ -0.73
Timp3P39876 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.47□□□□□ -0.73
Timp3P39876 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Timp3P39876 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.47□□□□□ -0.73
Timp3P39876 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Timp3P39876 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Timp3P39876 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Timp3P39876 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.46□□□□□ -0.73
Timp3P39876 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Gm8805-201ENSMUST00000117848 313 ntBASIC10.46□□□□□ -0.73
Timp3P39876 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.73
Timp3P39876 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.46□□□□□ -0.73
Timp3P39876 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.46□□□□□ -0.73
Timp3P39876 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.46□□□□□ -0.73
Timp3P39876 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.46□□□□□ -0.73
Timp3P39876 Gm43133-201ENSMUST00000197472 463 ntBASIC10.46□□□□□ -0.73
Timp3P39876 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.46□□□□□ -0.73
Timp3P39876 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Timp3P39876 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.46□□□□□ -0.73
Timp3P39876 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.46□□□□□ -0.73
Timp3P39876 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Timp3P39876 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Timp3P39876 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.46□□□□□ -0.73
Timp3P39876 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Timp3P39876 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Timp3P39876 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.46□□□□□ -0.74
Timp3P39876 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Timp3P39876 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Timp3P39876 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Timp3P39876 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
Timp3P39876 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Timp3P39876 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.45□□□□□ -0.74
Timp3P39876 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.45□□□□□ -0.74
Timp3P39876 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Timp3P39876 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms