Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Gm12957-201ENSMUST00000117835 377 ntBASIC12.82□□□□□ -0.36
Traf2P39429 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Traf2P39429 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Gm5370-201ENSMUST00000187187 574 ntBASIC12.82□□□□□ -0.36
Traf2P39429 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Gm37424-201ENSMUST00000191727 561 ntBASIC12.82□□□□□ -0.36
Traf2P39429 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.82□□□□□ -0.36
Traf2P39429 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.82□□□□□ -0.36
Traf2P39429 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.82□□□□□ -0.36
Traf2P39429 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.82□□□□□ -0.36
Traf2P39429 Snora73a-201ENSMUST00000082453 205 ntBASIC12.82□□□□□ -0.36
Traf2P39429 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.82□□□□□ -0.36
Traf2P39429 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Traf2P39429 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.82□□□□□ -0.36
Traf2P39429 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Traf2P39429 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Traf2P39429 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Traf2P39429 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Traf2P39429 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.81□□□□□ -0.36
Traf2P39429 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Traf2P39429 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Gm11591-201ENSMUST00000120063 702 ntBASIC12.81□□□□□ -0.36
Traf2P39429 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.81□□□□□ -0.36
Traf2P39429 Gm25261-201ENSMUST00000157416 134 ntBASIC12.81□□□□□ -0.36
Traf2P39429 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.81□□□□□ -0.36
Traf2P39429 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Traf2P39429 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.81□□□□□ -0.36
Traf2P39429 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.81□□□□□ -0.36
Traf2P39429 Gm8099-201ENSMUST00000200510 742 ntBASIC12.81□□□□□ -0.36
Traf2P39429 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.81□□□□□ -0.36
Traf2P39429 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Traf2P39429 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Traf2P39429 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.81□□□□□ -0.36
Traf2P39429 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Traf2P39429 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Traf2P39429 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms