Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Rfc1P35601 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfc1P35601 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rfc1P35601 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rfc1P35601 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rfc1P35601 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.42□□□□□ -0.26
Rfc1P35601 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.42□□□□□ -0.26
Rfc1P35601 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rfc1P35601 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.42□□□□□ -0.26
Rfc1P35601 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.42□□□□□ -0.26
Rfc1P35601 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.42□□□□□ -0.26
Rfc1P35601 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.42□□□□□ -0.26
Rfc1P35601 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Rfc1P35601 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rfc1P35601 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.42□□□□□ -0.26
Rfc1P35601 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rfc1P35601 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.41□□□□□ -0.26
Rfc1P35601 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.41□□□□□ -0.26
Rfc1P35601 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.41□□□□□ -0.26
Rfc1P35601 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rfc1P35601 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.41□□□□□ -0.26
Rfc1P35601 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.41□□□□□ -0.26
Rfc1P35601 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.41□□□□□ -0.26
Rfc1P35601 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.41□□□□□ -0.26
Rfc1P35601 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rfc1P35601 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rfc1P35601 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rfc1P35601 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.4□□□□□ -0.26
Rfc1P35601 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.4□□□□□ -0.26
Rfc1P35601 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.4□□□□□ -0.26
Rfc1P35601 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.4□□□□□ -0.26
Rfc1P35601 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rfc1P35601 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.4□□□□□ -0.26
Rfc1P35601 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.4□□□□□ -0.26
Rfc1P35601 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rfc1P35601 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rfc1P35601 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms