Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Apoc1P34928 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Apoc1P34928 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Apoc1P34928 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Apoc1P34928 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.11□□□□□ -0.63
Apoc1P34928 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Apoc1P34928 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Apoc1P34928 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Gm11978-201ENSMUST00000122315 466 ntBASIC11.11□□□□□ -0.63
Apoc1P34928 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.11□□□□□ -0.63
Apoc1P34928 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Mir6392-201ENSMUST00000184924 108 ntBASIC11.11□□□□□ -0.63
Apoc1P34928 Mir7654-201ENSMUST00000185082 70 ntBASIC11.11□□□□□ -0.63
Apoc1P34928 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Apoc1P34928 Gm44069-201ENSMUST00000204898 506 ntBASIC11.11□□□□□ -0.63
Apoc1P34928 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.11□□□□□ -0.63
Apoc1P34928 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Apoc1P34928 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.11□□□□□ -0.63
Apoc1P34928 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Apoc1P34928 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Apoc1P34928 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.11□□□□□ -0.63
Apoc1P34928 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Apoc1P34928 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Apoc1P34928 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Apoc1P34928 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.1□□□□□ -0.63
Apoc1P34928 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Apoc1P34928 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Apoc1P34928 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Apoc1P34928 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Apoc1P34928 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.1□□□□□ -0.63
Apoc1P34928 Gm6152-201ENSMUST00000151704 340 ntBASIC11.1□□□□□ -0.63
Apoc1P34928 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.1□□□□□ -0.63
Apoc1P34928 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Apoc1P34928 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.1□□□□□ -0.63
Apoc1P34928 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.1□□□□□ -0.63
Apoc1P34928 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Apoc1P34928 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Apoc1P34928 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Apoc1P34928 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Apoc1P34928 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Apoc1P34928 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.09□□□□□ -0.63
Apoc1P34928 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Apoc1P34928 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms