Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.04□□□□□ -0.32
Mmp13P33435 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.04□□□□□ -0.32
Mmp13P33435 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.04□□□□□ -0.32
Mmp13P33435 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.04□□□□□ -0.32
Mmp13P33435 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.04□□□□□ -0.32
Mmp13P33435 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Mmp13P33435 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.04□□□□□ -0.32
Mmp13P33435 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Mmp13P33435 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Mmp13P33435 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Mmp13P33435 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.03□□□□□ -0.32
Mmp13P33435 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Mmp13P33435 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.03□□□□□ -0.32
Mmp13P33435 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Mmp13P33435 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Mmp13P33435 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Mir686-201ENSMUST00000102174 109 ntBASIC13.03□□□□□ -0.32
Mmp13P33435 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.03□□□□□ -0.32
Mmp13P33435 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.03□□□□□ -0.32
Mmp13P33435 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Mmp13P33435 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Mmp13P33435 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Mmp13P33435 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Mmp13P33435 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Mmp13P33435 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp13P33435 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp13P33435 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Mmp13P33435 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp13P33435 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp13P33435 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp13P33435 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp13P33435 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Mmp13P33435 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Mmp13P33435 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.02□□□□□ -0.32
Mmp13P33435 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Mmp13P33435 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.02□□□□□ -0.33
Mmp13P33435 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.02□□□□□ -0.33
Mmp13P33435 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Mmp13P33435 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.02□□□□□ -0.33
Mmp13P33435 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.02□□□□□ -0.33
Mmp13P33435 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.02□□□□□ -0.33
Mmp13P33435 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.02□□□□□ -0.33
Mmp13P33435 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Mmp13P33435 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.02□□□□□ -0.33
Mmp13P33435 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.02□□□□□ -0.33
Mmp13P33435 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Mmp13P33435 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms