Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.73□□□□□ -0.53
Nedd8P29595 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.73□□□□□ -0.53
Nedd8P29595 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.73□□□□□ -0.53
Nedd8P29595 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.73□□□□□ -0.53
Nedd8P29595 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nedd8P29595 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nedd8P29595 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.73□□□□□ -0.53
Nedd8P29595 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Nedd8P29595 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nedd8P29595 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nedd8P29595 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nedd8P29595 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.72□□□□□ -0.53
Nedd8P29595 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.72□□□□□ -0.53
Nedd8P29595 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.72□□□□□ -0.53
Nedd8P29595 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.72□□□□□ -0.53
Nedd8P29595 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.72□□□□□ -0.53
Nedd8P29595 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Gm18766-201ENSMUST00000189811 808 ntBASIC11.72□□□□□ -0.53
Nedd8P29595 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.72□□□□□ -0.53
Nedd8P29595 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Gm5864-201ENSMUST00000202263 970 ntBASIC11.72□□□□□ -0.53
Nedd8P29595 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.72□□□□□ -0.53
Nedd8P29595 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.72□□□□□ -0.53
Nedd8P29595 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.72□□□□□ -0.53
Nedd8P29595 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.72□□□□□ -0.53
Nedd8P29595 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nedd8P29595 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.72□□□□□ -0.53
Nedd8P29595 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.72□□□□□ -0.53
Nedd8P29595 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nedd8P29595 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.71□□□□□ -0.53
Nedd8P29595 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Nedd8P29595 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Nedd8P29595 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.71□□□□□ -0.53
Nedd8P29595 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.71□□□□□ -0.53
Nedd8P29595 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.71□□□□□ -0.53
Nedd8P29595 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nedd8P29595 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.71□□□□□ -0.53
Nedd8P29595 Gm9630-201ENSMUST00000178304 885 ntBASIC11.71□□□□□ -0.53
Nedd8P29595 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms