Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Gm8738-201ENSMUST00000172606 329 ntBASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Gm38002-201ENSMUST00000193255 180 ntBASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Gm10478-201ENSMUST00000084451 396 ntBASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfrsf1bP25119 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Gm9823-201ENSMUST00000051212 327 ntBASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfrsf1bP25119 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Gm6023-201ENSMUST00000118217 606 ntBASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.78□□□□□ -0.52
Tnfrsf1bP25119 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms