Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tpm3P21107 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tpm3P21107 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.25□□□□□ -0.13
Tpm3P21107 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm3P21107 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tpm3P21107 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.24□□□□□ -0.13
Tpm3P21107 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tpm3P21107 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Tpm3P21107 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Tpm3P21107 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Tpm3P21107 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.24□□□□□ -0.13
Tpm3P21107 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.24□□□□□ -0.13
Tpm3P21107 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.24□□□□□ -0.13
Tpm3P21107 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Tpm3P21107 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Map1b-203ENSMUST00000223725 2669 ntBASIC14.24□□□□□ -0.13
Tpm3P21107 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.24□□□□□ -0.13
Tpm3P21107 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Tpm3P21107 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.23□□□□□ -0.13
Tpm3P21107 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tpm3P21107 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tpm3P21107 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.23□□□□□ -0.13
Tpm3P21107 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.23□□□□□ -0.13
Tpm3P21107 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tpm3P21107 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.23□□□□□ -0.13
Tpm3P21107 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.23□□□□□ -0.13
Tpm3P21107 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Tpm3P21107 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tpm3P21107 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.23□□□□□ -0.13
Tpm3P21107 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tpm3P21107 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Tpm3P21107 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm3P21107 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tpm3P21107 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.22□□□□□ -0.13
Tpm3P21107 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Mir449b-201ENSMUST00000104833 80 ntBASIC14.22□□□□□ -0.13
Tpm3P21107 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Tpm3P21107 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.22□□□□□ -0.13
Tpm3P21107 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm3P21107 Gm13813-201ENSMUST00000120998 787 ntBASIC14.22□□□□□ -0.13
Tpm3P21107 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms