Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Col1a1P11087 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col1a1P11087 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.72□□□□□ -0.05
Col1a1P11087 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col1a1P11087 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col1a1P11087 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Col1a1P11087 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.72□□□□□ -0.05
Col1a1P11087 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.72□□□□□ -0.05
Col1a1P11087 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.72□□□□□ -0.05
Col1a1P11087 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Col1a1P11087 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col1a1P11087 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.72□□□□□ -0.05
Col1a1P11087 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.72□□□□□ -0.05
Col1a1P11087 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.72□□□□□ -0.05
Col1a1P11087 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.72□□□□□ -0.05
Col1a1P11087 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.72□□□□□ -0.05
Col1a1P11087 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col1a1P11087 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col1a1P11087 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.72□□□□□ -0.05
Col1a1P11087 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col1a1P11087 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col1a1P11087 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col1a1P11087 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.71□□□□□ -0.05
Col1a1P11087 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col1a1P11087 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Col1a1P11087 Gm13809-201ENSMUST00000117921 597 ntBASIC14.71□□□□□ -0.05
Col1a1P11087 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.71□□□□□ -0.05
Col1a1P11087 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.71□□□□□ -0.05
Col1a1P11087 Gm7666-201ENSMUST00000146631 819 ntBASIC14.71□□□□□ -0.05
Col1a1P11087 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.71□□□□□ -0.05
Col1a1P11087 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Gm9358-201ENSMUST00000183067 927 ntBASIC14.71□□□□□ -0.05
Col1a1P11087 Gm37905-201ENSMUST00000195310 341 ntBASIC14.71□□□□□ -0.05
Col1a1P11087 Gm4157-201ENSMUST00000211647 679 ntBASIC14.71□□□□□ -0.05
Col1a1P11087 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.71□□□□□ -0.05
Col1a1P11087 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.71□□□□□ -0.05
Col1a1P11087 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col1a1P11087 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.71□□□□□ -0.05
Col1a1P11087 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Col1a1P11087 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Col1a1P11087 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col1a1P11087 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.7□□□□□ -0.06
Col1a1P11087 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.7□□□□□ -0.06
Col1a1P11087 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
Col1a1P11087 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col1a1P11087 Gm27530-201ENSMUST00000184096 98 ntBASIC14.7□□□□□ -0.06
Col1a1P11087 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.7□□□□□ -0.06
Col1a1P11087 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.7□□□□□ -0.06
Col1a1P11087 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Col1a1P11087 Gm9132-201ENSMUST00000210182 832 ntBASIC14.7□□□□□ -0.06
Col1a1P11087 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.7□□□□□ -0.06
Col1a1P11087 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.7□□□□□ -0.06
Col1a1P11087 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.7□□□□□ -0.06
Col1a1P11087 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col1a1P11087 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col1a1P11087 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms