Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.21□□□□□ -0.61
Ccl3P10855 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ccl3P10855 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.21□□□□□ -0.61
Ccl3P10855 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.21□□□□□ -0.61
Ccl3P10855 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Ccl3P10855 Gm12380-201ENSMUST00000119012 544 ntBASIC11.21□□□□□ -0.61
Ccl3P10855 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.21□□□□□ -0.61
Ccl3P10855 Gm9550-201ENSMUST00000161130 862 ntBASIC11.21□□□□□ -0.61
Ccl3P10855 Gm9230-201ENSMUST00000188228 532 ntBASIC11.21□□□□□ -0.61
Ccl3P10855 AY036118-201ENSMUST00000200021 923 ntBASIC11.21□□□□□ -0.61
Ccl3P10855 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.21□□□□□ -0.61
Ccl3P10855 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.21□□□□□ -0.61
Ccl3P10855 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.21□□□□□ -0.61
Ccl3P10855 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ccl3P10855 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ccl3P10855 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ccl3P10855 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.21□□□□□ -0.61
Ccl3P10855 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl3P10855 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl3P10855 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Ccl3P10855 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl3P10855 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl3P10855 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl3P10855 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl3P10855 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl3P10855 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.21□□□□□ -0.62
Ccl3P10855 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl3P10855 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl3P10855 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccl3P10855 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl3P10855 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ccl3P10855 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Ccl3P10855 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccl3P10855 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl3P10855 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccl3P10855 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Gm9062-201ENSMUST00000117712 727 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Rmrp-201ENSMUST00000157463 271 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccl3P10855 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccl3P10855 Gm42937-201ENSMUST00000197360 752 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl3P10855 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.2□□□□□ -0.62
Ccl3P10855 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl3P10855 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccl3P10855 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Ccl3P10855 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl3P10855 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccl3P10855 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccl3P10855 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms