Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.93□□□□□ -0.5
Nid1P10493 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Gm24644-201ENSMUST00000157114 139 ntBASIC11.93□□□□□ -0.5
Nid1P10493 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.93□□□□□ -0.5
Nid1P10493 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.93□□□□□ -0.5
Nid1P10493 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.93□□□□□ -0.5
Nid1P10493 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nid1P10493 Gm9794-201ENSMUST00000202370 423 ntBASIC11.93□□□□□ -0.5
Nid1P10493 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.93□□□□□ -0.5
Nid1P10493 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.93□□□□□ -0.5
Nid1P10493 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.93□□□□□ -0.5
Nid1P10493 Gm19163-201ENSMUST00000223313 780 ntBASIC11.93□□□□□ -0.5
Nid1P10493 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nid1P10493 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nid1P10493 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.93□□□□□ -0.5
Nid1P10493 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.93□□□□□ -0.5
Nid1P10493 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.93□□□□□ -0.5
Nid1P10493 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nid1P10493 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nid1P10493 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.92□□□□□ -0.5
Nid1P10493 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Nid1P10493 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.92□□□□□ -0.5
Nid1P10493 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.92□□□□□ -0.5
Nid1P10493 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Nid1P10493 Gm19184-201ENSMUST00000196798 928 ntBASIC11.92□□□□□ -0.5
Nid1P10493 Gm7561-201ENSMUST00000211203 886 ntBASIC11.92□□□□□ -0.5
Nid1P10493 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.92□□□□□ -0.5
Nid1P10493 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.92□□□□□ -0.5
Nid1P10493 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nid1P10493 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nid1P10493 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Nid1P10493 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nid1P10493 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.91□□□□□ -0.5
Nid1P10493 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.91□□□□□ -0.5
Nid1P10493 Gm7029-201ENSMUST00000173226 450 ntBASIC11.91□□□□□ -0.5
Nid1P10493 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nid1P10493 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Gm38092-201ENSMUST00000195600 653 ntBASIC11.91□□□□□ -0.5
Nid1P10493 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.91□□□□□ -0.5
Nid1P10493 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Nid1P10493 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.91□□□□□ -0.5
Nid1P10493 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.91□□□□□ -0.5
Nid1P10493 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nid1P10493 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms