Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ly6c1P0CW02 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm15968-201ENSMUST00000119342 1168 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm12291-201ENSMUST00000121627 311 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm18041-201ENSMUST00000218210 618 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm19309-201ENSMUST00000218295 205 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 AC160962.2-201ENSMUST00000224761 632 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ly6c1P0CW02 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Gm16379-201ENSMUST00000161469 348 ntBASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Gm28439-201ENSMUST00000187714 876 ntBASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Gm8762-201ENSMUST00000193486 339 ntBASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Gm43133-201ENSMUST00000197472 463 ntBASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Mir339-201ENSMUST00000083659 96 ntBASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ly6c1P0CW02 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms